plots listing  PROCHECK-NMR Operating Manual

Sample plots

Below are examples of the plots produced by PROCHECK-NMR for the solution structure of the HU protein from Bacillus stearothermophilus (Vis et al., 1995).

NOTE: The examples come from an early stage of refinement and deliberately show more restraint violations than in the final published coordinates.

The model-selection option has been used to give only the first 5 of the 25 models in the file.

Each example contains a brief Description of the plot and the main Options that can be selected via the parameter file, procheck_nmr.prm. By clicking on the plot example you will get a full-size version of the illustration.

Note that the asterisked plots below are switched off in the default parameter file, procheck_nmr.prm, and so will not normally be produced unless you edit the file and switch those plots back on (see Which plots to produce).


plots listing  PROCHECK-NMR Operating Manual